Enabling technologies in super-resolution fluorescence  microscopy: Reporters, labeling, and methods of measurement
A.-M. Achimovich, H. Ai, A. Gahlmann. Current Opinion in Structural Biology , 2019, 58, 224-232

LCuts: Linear Clustering of Bacteria using Recursive Graph Cuts
J. Wang, T. Batabyal, M. Zhang, J. Zhang, A. Aziz, A. Gahlmann, S.T. Acton
2019 IEEE International Conference on Image Processing (ICIP) 1575-1579 (2019)

Resolving cytosolic diffusive states in bacteria by single-molecule tracking
J. Rocha, J. Corbitt, T. Yan, C. Richardson, A. Gahlmann. Biophysical Journal, 2019, 116, 1970-1983

Computational correction of spatially-variant optical aberrations in 3D single-molecule localization microscopy
T. Yan, C. Richardson, M. Zhang, A. Gahlmann. Optics Express, 2019, 27, 12582

Single-Molecule Tracking Microscopy - A Tool For Determining The Diffusive States Of Cytosolic Molecules
J. Rocha, A. Gahlmann. The Journal of Visualized Experiments (JoVE), 2019, 151, e59387

Single-molecule tracking in live Yersinia enterocolitica reveals distinct cytosolic complexes of injectisome subunits 
J. Rocha, C. Richardson, M. Zhang, C. Darch, E. Cai, A. Diepold, A. Gahlmann
Integrative Biology, 2018, 10, 502 (Cover Article)

BACT-3D: A level set segmentation approach for dense multi-layered 3D bacterial biofilms 
J. Wang, R. Sarkar, A. Aziz, A. Vaccari, A. Gahlmann, S. Acton
2017 IEEE International Conference on Image Processing (ICIP) 330-334 (2017)

Bacterial Scaffold Directs Pole-Specific Centromere Segregation 
J.L. Ptacin, A. Gahlmann, G.R. Bowman , A.M. Perez, A.R.S. von Diezmann, M.R. Eckart,  W.E. Moerner, and L. Shapiro.  Proc. Natl. Acad. Sci. USA, 2014, 111, E2046

Exploring Bacterial Cell Biology with Single-Molecule Tracking and Super-Resolution Imaging
A. Gahlmann and W.E. Moerner.  Nat. Rev. Microbiol., 2013, 12, 9  (Cover Article)

Quantitative Multicolor Subdiffraction Imaging of Bacterial Protein Ultrastructures in Three Dimensions 
A. Gahlmann, J.L. Ptacin, G. Grover, S. Quirin, A.R.S. von Diezmann, M.K. Lee, M.P. Backlund, L. Shapiro, R. Piestun, and W.E. Moerner. Nano Lett., 2013, 13, 987

Structural Dynamics of Free Amino Acids in Diffraction
I-R. Lee, A. Gahlmann, and A.H. Zewail, Angew. Chem. Int. Ed., 2012, 51, 99

Direct Structural Determination of Conformations of Photoswitchable Molecules by Laser Desorption-Electron Diffraction 
A. Gahlmann, I-R. Lee, and A.H. Zewail. Angew. Chem. Int. Ed., 2010, 49, 6524

Structure of Isolated Biomolecules by Electron Diffraction-Laser Desorption: Uracil and Guanine 
A. Gahlmann, S.T. Park, and A.H. Zewail.  J. Amer. Chem. Soc., 2009, 131, 2806  (Cover Article)

Ultrafast Electron Diffraction Reveals Dark Structures of the Biological Chromophore Indole
S.T. Park, A. Gahlmann, Y. He, J.S. Feenstra, and A.H. Zewail, Angew. Chem. Int. Ed., 2006, 47, 9496

Ultrashort Electron Pulses for Diffraction, Crystallography and Microscopy: Theoretical and Experimental Resolutions 
A. Gahlmann, S.T. Park, and A.H. Zewail.  Phys. Chem. Chem. Phys., 2008, 10, 2894

Ultrafast Electron Diffraction: Structural Dynamics of Molecular Rearrangement in the NO Release from Nitrobenzene
Y. He, A. Gahlmann, J.S. Feenstra, S.T. Park, and A.H. Zewail, Chemistry - An Asian Journal, 2006, 1, 56

Investigating the Effect of the Zwitterion/Lactone Equilibrium of Rhodamine B on the Cybotactic Region of the Acetonitrile/scCO2 Cosolvent
A. Gahlmann, K.D. Kester, and S.G. Mayer, J. Phys. Chem. A., 2005, 109, 1753